Well, yes and no. It depends on your goals. If you are up against nothing but a fleet of heavy armor (hohos, flack, carriers) definatly target the hoshikos first. so they stop repairing things as soon as possible. You see, if everything have heavy armor, you have the exact same modifier vs everything.... e.g. poor.
Now, if you want to, say, sink the capital ship (which is what EVERYONE wants to do.) and your enemy has, say, 10 hoshikos... if you target the hohos first, thats a lot of tank you have to eat though before that capital ship loses its 20hull/sec.
that 20 hull/sec is about (ish, depending on cap ship level and armor) 6 assailants worth of damage. In other words, If you lose more than 6 assailants in the time it takes you to kill the hoshikos, then you have LOST dps on that capital ship than if you ignored the hohos and just ffed the capital ship.
it gets even trickier with say, lrm+hohos. ya see, if you target the hohos, the reduction in damage of the tec player is negligible, while his lrms can attack your lrms without losing numbers. you see, hohos are very beefy compared to a javillis, i mean, come on, a hoho has 3/4 the hp of a HC, for 2/5ths the fleet supply. (mind you, much more than 2/5ths the cost!! 56% using 4.5 rule), and your assailants have the same modifier vs hohos as heavy cruisers.
SO, lets assume the tec has tier 2 upgrades. for every hoho you kill, (not including repairs here) you could have killed...
and this is a little on the low side due to shield mitigation/time changes... but 2.1 lrms.
now, if you kill 1 hoshiko instead of 2.1 lrms, you have saved the tec player 500ish credit equivlants (using 4.5 rule)
now, remember these numbers are on the low side. hoshikos are much better at repairing themselves than LRMS, so that skews things further towards the tec player, AND, that shield mitigation thing... it takes a significant portion ofthe javillis's hp to reach max mitigation, during which time you will be doing more damage.
and if you can do enough DPV to pop a LRM, (which is not hard), well, repairing doesnt do much then, does it.
so, wow, ya, thats intresting. as odd as it seems, youll hurt the tec player more by killing javillis than the hoshikos...
SO, yes, I am saying dont target the hoskikos. (that just feels so weird, to say that, it kinda goes against everything doesnt it... i feel like this should be tested somehow.)