It depends what stage of the game you are playing at.
Early game when its only pirates your worried about, bombers will take out the pirate ships quickest.
But if your being attacked by an enemy fleet that has massed fighters, then your bombers are vulnerable and you need fighters. So mid game you need about a 50/50 mix. Late game your probably better with more fighters than bombers, as the enemy fleets get larger, but it depends on what they are composed of.
The other thing is that Bombers will target ships by themselves, where fighters need to be selected as a group and then told to attack ships. So if your busy directing capital ships, bombers are much better since they dont need direction to attack ships. Left alone, once all the enemy fighters and carriers are gone, your fighters will swan around doing nothing while there is still a significant fleet to attack, while the bombers are in there killing ships.