Turn down your effects settings, especially for textures.
Go to the user.setting file and bring up your particle count.
Doing that fixed this issue for me.
I have the particle count at 12000 and I have not touched the effect settings they are at low for textures (the default settings).
But what is really weird is that this only happens when playing as the Vasari, if I am any other race it does not happen. Even when I am any other race and fighting the Vasari (or with them) the effects do not disappear just happens when I am playing them.