I haven't seen any frigates, cruisers, or cap ships flying through asteroids...
But what I HAVE seen are fighters flying through planets and suns...  like directly through them.  That may not sound like a big deal, but when my fleet jumps into a system directly opposite the enemy's fleet, it feels a little unfair that my flights of bombers can fly straight through a planet instead of around it...  that makes for a quicker attack, less reaction time, all of that.  I don't have any screen caps or video of it, but I've seen it 3 times now.